Additional links to manuscripts and pdf's are available through ResearchGate:

Datasets and software packages

  1. Gough C, Bohrer G, Curtis P. AmeriFlux US-UMB Univ. of Mich. Biological Station,
  2. Gough C, Bohrer G, Curtis P. AmeriFlux US-UMd UMBS Disturbance,
  3. Bohrer G. AmeriFlux US-OWC Old Woman Creek,
  4. Bohrer G. AmeriFlux US-ORv Olentangy River Wetland Research Park,
  5. Bohrer G. AmeriFlux US-UM3 Douglas Lake,
  6. Villa* JA, Ju* Y, Smith+ GJ, Angle+ JC, Renteria L, Arntzen E, Harding SF, Stegen JC, Wrighton KC, Bohrer G (2020): Chamber Flux and Porewater Concentration of CH4, CO2 and N2O, 2018, Columbia River bank at the Hanford site, WA, USA. Accounting for hydrological and microbial processes on greenhouse gas budgets from river systems. ESS-DiVE.  
  7. Bohrer G, Ju* Y, Arend K, Morin* T, Rey-Sanchez* C, Wrighton K, Villa* J. (2019). Methane and CO2 chamber fluxes and porewater concentrations US-OWC Ameriflux wetland site, 2015-2018. AmeriFlux Management Project. ESS-DiVE.
  8. Poyatos et al. (2019). SAPFLUXNET: A global database of sap flow measurements
  9. Atkins J, Bohrer G, Fahey R, Hardiman B, Gough C, Morin* T, Stovall A, Zimmerman N. (2018). forestr: Ecosystem and Canopy Structural Complexity Metrics from LiDAR


Journal Publications

  1. Friedemann G, Leshem Y, McClain* K, Bohrer G, Bar-Massada A, Izhaki I. (2020) Poleward non-breeding migration of a breeding population: Challenging the traditional perspective of avian migration. Journal of Avian Biology. (In press, available on-line,

  2. Fisher JB, Lee B, Purdy AJ, Halverson GH, Dohlen MB, Cawse-Nicholson K, Wang A, Anderson RG, Aragon B, Arain MA, Baldocchi DD, Baker JM, Barral H, Bernacchi CJ, Bernhofer C, Biraud SC, Bohrer G, Brunsell N, Cappelaere B, Castro-Contreras S, Chun J, Conrad BJ, Cremonese E, Demarty J, Desai AR, De Ligne A, Foltýnová L, Goulden ML, Griffis TJ, Grünwald T, Johnson MS, Kang M, Kelbe D, Kowalska N, Lim J-H, Maïnassara I, McCabe MF, Missik JEC, Mohanty BP, Moore CE, Morillas L, Morrison R, Munger JW, Posse G, Richardson AD, Russell ES, Ryu Y, Sanchez-Azofeifa A, Schmidt M, Schwartz E, Sharp I, Šigut L, Tang Y, Hulley G, Anderson M, Hain C, French A, Wood E, Hook S. (2020) ECOSTRESS: NASA's next generation mission to measure evapotranspiration from the International Space Station. Water Recourses Research, 56, e2019WR026058

  3. Russell SJ, Vines* CD, Bohrer G, Johnson DR, Villa* JA, Heltzel R, Rey-Sanchez* C, Hatala Matthes J. (2020) Paired CH4 concentration and stable isotope measurements identify concentration spikes and source attribution at a hydraulic fracturing field in West Virginia. Atmospheric Environment 228:117452

  4. Villa* JA, Smith+ JG, Ju* Y, Renteria L, Angle+ JC, Arntzen E, Harding SF, Ren H, Chen X, Sawyer AH, Graham EB, Stegen JC, Wrighton KC, Bohrer G. (2020) Methane and nitrous oxide porewater concentrations and surface fluxes of a regulated river. Science of the Total Environment 715: 136920

  5. Charles+ M, Ziv G, Bohrer G, Bakshi BR. (2020) Connecting air quality regulating ecosystem services with beneficiaries through quantitative serviceshed analysis. Ecosystem Services 41:101057

  6. Knox SH, Jackson RB, Poulter B, McNicol G, Fluet-Chouinard E, Zhang Z, Hugelius G, Bousquet P, Canadell JG, Saunois M, Papale D, Chu H, Keenan TF, Baldocchi D, Torn MS, Mammarella I, Trotta C, Aurela M, Bohrer^ G, Campbell D,  Cescatti A, Chamberlain S, Chen J, Chen W, Dengel S, Desai AR, Euskirchen E, Friborg T, Gasbarra D, Goded I, Goeckede M, Heimann M,  Helbig M, Hirano T, Hollinger DY, Iwata H, Kang M, Klatt J, Krauss KW, Kutzbach L, Lohila A, Mitra B, Morin* TH, Nilsson MB, Niu S,  Noormets A, Oechel WC, Peichl M, Peltola O, Reba ML, Richardson AD, Runkle BRK, Ryu Y, Sachs T, Schäfer KVR, Schmid HP, Shurpali N, Sonnentag O, Tang ACI, Ueyama M, Vargas R, Vesala T, Ward EJ, Windham-Myers L, Wohlfahrt G, Zona D. (2019) FLUXNET-CH4 Synthesis Activity: Objectives, Observations, and Future Directions. Bulletin of the American Meteorological Society 100: 2607–2632

  7. Narrowe AB, Borton MA, Hoyt DW, Smith+ GJ, Daly RA, Angle+ JC, Eder E, Wong AR, Wolfe RA, Pappas A, Bohrer G, Miller CS, Wrighton KC. (2019) Uncovering the diversity and activity of methylotrophic methanogens in freshwater wetland soils. mSystems 4:e00320-19

  8. Rey-Sanchez* C, Bohrer G, Slater J, Li YF, Grau-Andrés R, Hao+ Y, Rich VI, Davies GM. (2019) The ratio of methanogens to methanotrophs and water-level dynamics drive methane exchange velocity in a temperate kettle-hole peat bog. Biogeosciences 16:3207–3231

  9. Villa* J, Ju* Y, Vines* C, Rey-Sanchez* C, Morin* TH, Wrighton KC, Bohrer G. (2019) Relationships between methane and carbon dioxide fluxes in a temperate cattail-dominated freshwater wetland. Journal of Geophysical Research-Biogeosciences 124(7):2076-2089

  10. Boelman N, Liston G, Gurarie E, Meddens A, Mahoney P, Kirchner P, Bohrer G, Brinkman T, Cosgrove C, Eitel J, Hebblewhite M, Kimball J, LaPoint S, Nolin A, Højlund Pedersen S, Prugh L, Reinking A, Vierling L. (2019) Integrating snow science and wildlife ecology in Arctic-boreal North America. Environmental Research Letters 14:010401

  11. Miller HJ, Dodge S, Miller J, Bohrer G. (2019) Towards an integrated science of movement: converging research on animal movement ecology and human mobility. International Journal of Geographical Information Science 33: 855-876

  12. Mirfenderesgi* G, Matheny* AM, Bohrer G. (2019) Hydrodynamic trait coordination and cost-benefit tradeoffs throughout the isohydric-anisohydric continuum in trees. Ecohydrology 12:e2041

  13. Villa* JA, Mejía GM, Velásquez D, Botero A, Acosta* SA, Marulanda JM, Osorno* AM, Bohrer G. (2019) Effects of plant diversity and water-table depth on carbon sequestration and methane flux in a tropical alpine wetland. Science of the Total Environment 654:651-661

  14. Smith+ GJ, Angle+ JC, Solden+ LM, Borton MA, Morin* TH, Daly RA, Johnston MD, Stefanik* KC, Wolfe R, Bohrer G, Wrighton KC. (2018) Members of the genus Methylobacter are inferred to account for the majority of aerobic methane oxidation in oxic soils from a freshwater wetland mBio 9: e00815-18 

  15. Atkins J, Bohrer G, Fahey R, Hardiman BS, Morin* TH, Stovall A, Zimmerman N, Gough C. (2018). Quantifying vegetation and canopy structural complexity from terrestrial LiDAR data using the FORESTR R package. Methods in Ecology and Evolution 9:2057-2066 (+Journal cover image)

  16. Chu H, Baldocchi DD, Poindexter C, Abraha M, Desai AR, Bohrer^ G, Arain MA, Griffis T, Blanken PD, O'Halloran TL, Thomas RQ, Zhang Q, Burns SP, Frank JM, Christian D, Brown S, Black TA, Gough CM, Law BE, Lee X, Chen J, Reed DE, Massman WJ, Clark K, Hatfield J, Prueger J, Bracho R, Baker JM, Martin TM. (2018) Temporal dynamics of aerodynamic canopy height derived from eddy covariance momentum flux data across North American Flux Networks. Geophysical Research Letters 45: 9275-9287

  17. Pappas C, Matheny* AM, Baltzer JL, Barr A, Black TA, Bohrer G, Detto M, Maillet J, Roy A, Sonnentag O, Stephens J. (2018) Boreal tree hydrodynamics: asynchronous, diverging, yet complementary. Tree Physiology 38:953–964

  18. Rey-Sánchez* AC, Morin* TH, Stefanik* KC, Wrighton K, Bohrer G. (2018) Determining total emissions and environmental drivers of methane flux in a Lake Erie estuarine marsh: The Old Woman Creek Wetland. Ecological Engineering 114:7-15

  19. Morin* TH, Rey-Sánchez* AC, Vogel CS, Matheny* AM, Kenny* WT, Bohrer G. (2017) Carbon dioxide emissions from an oligotrophic temperate lake: An eddy covariance approach.  Ecological Engineering 114:25-33

  20. Fotis+ A, Morin* TH, Fahey RT, Hardiman BS, Bohrer G, Curtis PS. (2018) Forest structure in space and time: biotic and abiotic determinants of canopy complexity and their effects on net primary productivity. Agricultural and Forest Meteorology 250-251:181-191.

  21. Rey-Sánchez* AC, Bohrer G, Morin* TH, Shlomo* D, Mirfenderesgi* G, Gildor H, Genin A. (2018). Evaporation and CO2 fluxes in a coastal reef: Comparing eddy covariance measurements to model estimates. Ecosystem Health and Sustainability 3(10):1392830

  22. Angle+ J, Morin* TH, Solden L, Narrowe A, Smith G, Borton M, Rey-Sánchez* AC, Daly R, Mirfenderesgi* G, Hoyt D, Riley W, Miller C, Bohrer G, Wrighton K. (2017) Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions. Nature Communications 8: 1567

  23. Matheny* AM, Garrity* SR, Bohrer G. (2017) The calibration and use of capacitance sensors to monitor stem water content in trees. Journal of Visualized Experiments e57062 

  24. Yan H, Wang SQ, Yu KL, Wang B, Yu Q, Bohrer^ G, Billesbach D, Bracho R, Rahman AF, Shugart HH. (2017) A novel diffuse fraction-based two-leaf light use efficiency model: An application quantifying photosynthetic seasonality across 20 AmeriFlux flux tower sites. Journal of Advances in Modeling Earth Systems. 9:2317-2332

  25. Kenny* WT, Bohrer G, Morin* TH, Vogel CS, Matheny* AM, Desai AR. (2017) A numerical case study of the implications of secondary circulations to the interpretation of eddy-covariance measurements over small lakes. Boundary-Layer Meteorology 165:311-332

  26. Montané F, Fox AM, Arellano AF, MacBean N, Alexander MR, Dye A, Bishop DA, Trouet V, Babst F, Hessl AE, Pederson N, Blanken PD, Bohrer^ G, Gough CM, Litvak ME, Novick KA, Phillips RP, Wood JD, Moore DJP. (2017) Evaluating the effect of alternative carbon allocation schemes in a land surface model (CLM4.5) on carbon fluxes, pools and turnover in temperate forests. Geoscientific Model Development 10:3499-3517

  27. Matheny* AM, Fiorella RP, Bohrer G, Poulsen CJ, Morin* TH, Wunderlich* A, Vogel CS, Curtis PS. (2017) Contrasting strategies of hydraulic control in two co-dominant temperate tree species. Ecohydrology, 10(3):e1815

  28. Morin* TH, Bohrer G, Stefanik* KC, Rey Sánchez* AC, Matheny* AM, Mitsch WJ. (2017) Combining eddy-covariance and chamber measurements to determine the methane budget from a small, heterogeneous urban floodplain wetland park. Agricultural and Forest Meteorology 237-238:160-170

  29. Matheny* AM, Mirfenderesgi* G, Bohrer G. (2017) Trait-based representation of hydrological functional properties of plants in weather and ecosystem models. Plant Diversity, 39:1-12 

  30. Hardiman BS, Gough CM, Butnor JR, Bohrer G, Detto M, Curtis PS. (2017) Coupling fine-scale root and canopy structure using ground-based remote sensing. Remote Sensing 9(2):182

  31. Wu C, Peng D, Soudani K, Siebicke L, Gough CM, Arain MA, Bohrer^ G, Lafleur PM, Peichl M, Gonsamo A, Xu S, Fang B, Ge Q. (2017) Land surface phenology derived from normalized difference vegetation index (NDVI) at global FLUXNET sites. Agriculture and Forest Meteorology 233:171-182

  32. Rodríguez-Ronderos ME, Bohrer G, Sánchez-Azofeifa A, Powers JS, Schnitzer SA. (2016) Contribution of lianas to plant area index and canopy structure in a Panamanian forest. Ecology, 97:3271-3277

  33. Weinzierl R, Bohrer G, Kranstauber B, Fiedler W, Wikelski M, Flack, A. (2016) Wind estimation based on thermal soaring of birds. Ecology & Evolution, 6:8706-8718

  34. Novick KA, Ficklin D, Stoy PC, Williams CA, Bohrer^ G, Oishi AC, Papuga SA, Blanken PD, Noormets A, Sulman B, Scott R, Wang L, Phillips RP. (2016) The increasing importance of atmospheric demand for ecosystem water and carbon fluxes. Nature Climate Change 6:1023-1027  

  35. Sherub S, Bohrer G, Wikelski M, Weinzierl R. (2016) Behavioural adaptations to flight into thin air. Biology Letters 12:20160432 (+Journal cover image)

  36. Zscheischler J, Fatichi S, Wolf S, Blanken P, Bohrer^ G, Clark K, Desai AR, Hollinger D, Keenan T, Novick KA, Seneviratne SI. (2016) Short-term favorable weather conditions are an important control of interannual variability in carbon and water fluxes. Journal of Geophysical Research-Biogeosciences 121:2186-2198  

  37. Friedemann G, Leshem Y, Kerem L, Shacham B, Bar-Massada A, Mcclain* KM, Bohrer G, Izhaki I. (2016) Multidimensional differentiation in foraging resource use during breeding of two sympatric top predators. Scientific Reports 6:35031

  38. Mirfenderesgi* G, Bohrer G, Matheny* AM, Fatichi S, Frasson* RPdM, Schäfer KVR. (2016) Tree level hydrodynamic approach for resolving aboveground water storage and stomatal conductance and modeling the effects of tree hydraulic strategy. Journal of Geophysical Research-Biogeosciences 121:1792–1813

  39. Cheng S, Steiner A, Hollinger D, Bohrer G, Nadelhoffer K. (2016) Using satellite-derived optical thickness to assess the influence of clouds on terrestrial carbon uptake. Journal of Geophysical Research-Biogeosciences 121:1747–1761

  40. Treep+ HJ, Bohrer G, Shamoun-Baranes J, Duriez O, Frasson* RPdM, Bouten W. (2016) Using high resolution GPS tracking data of bird flight for meteorological observations, Bulletin of American Meteorological Society 6:951-961 (Featured in Nature, "Research Highlights" 526:296
  41. Deppe JL, Ward MP, Bolus RT, Diehl RH, Celis-Murillo A, Zenzal TJ, Moore FR, Benson TJ, Smolinsky JA, Schofield LN, Enstrom DA, Paxton EH, Bohrer G, Beveroth TA, Raim A, Obringer* RL, Delaney D, Cochran WW. (2015) Fat, weather, and date affect migratory songbirds' departure decisions, routes, and time it takes to cross the Gulf of Mexico. Proceedings of the National Academy of Science USA 112:E6331–E6338 (Featured in NSF on-line Press Release 15-139:, and in Science Daily
  42. Frasson* RPdM, Bohrer G, Medvigy D, Matheny* AM, Vogel CS, Gough CM, Maurer* KD, Curtis PS. (2015) Modeling forest carbon cycle response to tree mortality: effects of plant functional type and disturbance intensity. Journal of Geophysical Research-Biogeosciences 120:2178-2193
  43. Matheny* AM, Bohrer G, Garrity SR, Morin* TH, Howard CJ, Vogel CS. (2015) A novel method for measurement of stem water storage reveals differences in water use between two hardwood species. Ecosphere 6(9):Article-165.
  44. Bryan A, Cheng SJ, Ashworth K, Guenther AB, Hardiman BS, Bohrer G, Steiner AL. (2015) Forest-atmosphere BVOC exchange in diverse and structurally complex canopies: 1-D modeling of a mid-successional forest in northern Michigan. Atmospheric Environment 120:217-226
  45. D'Odorico P, Gonsamo A, Gough C, Bohrer^ G, Morison J, Wilkinson M, Hanson P, Gianelle D, Fuentes J, Buchmann N. (2015) The match and mismatch between photosynthesis and land surface phenology of deciduous forests. Agricultural & Forest Meteorology 214-215:25-38
  46. Maurer* KD, Bohrer G, Kenny* WT, Ivanov VY. (2015) Large eddy simulations of surface roughness parameter sensitivity to canopy structure characteristics. Biogeosciences, 12:2533-2548
  47. Toomey M, Friedl MA, Frolking S, Hufkens K, Klosterman K, Sonnentag O, Baldocchi DD, Bernacchi CJ, Biraud SC, Bohrer^ G, Brzostek E, Burns SP, Coursolle C, Hollinger DY, Margolis HA, McCaughey H, Monson RK, Munger JW, Pallardy S, Phillips RP, Torn MS, Wharton S, Zeri M, Richardson AD. (2015) Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis. Ecological Applications 25:99-115
  48. Bond-Lamberty, B, Fisk J, Holm JA, Bailey V, Bohrer G, Gough CM. (2015) Moderate forest disturbance as a stringent test for gap and big-leaf models. Biogeosciences 12:513-526
  49. Hadlocon LS, Bohrer G, Kenny* WT, Garrity* SR, Wang J, Wyslouzil B, Upadhyay, J. (2015) Modeling of particulate matter dispersion from a poultry facility using AERMOD. Journal of the Air & Waste Management Association 65:206-217
  50. Cheng SJ, Bohrer G, Steiner AL, Hollinger DY, Suyker A, Phillips RP, Nadelhoffer KJ. (2015) Variations in the influence of diffuse light on gross primary productivity in temperate ecosystems. Agriculture and Forest Meteorology 201:98-110
  51. Yan H, Wang S, Billesbach D, Oechel W, Bohrer^ G, Meyers T, Martin TA, Matamala R, Phillips RP, Rahman F, Yu Q, Shugart HH. (2015) Improved global simulations of gross primary product based on a new definition of water stress factor and a separate treatment of C3 and C4 plants. Ecological Modelling, 297:42-59
  52. Matheny* AM, Bohrer G, Vogel CS, Morin* TH, He+ L, Frasson* RPdM, Mirfenderesgi* G, Schäfer KVR, Gough CM, Ivanov VY, Curtis PS, (2014) Species-specific transpiration responses to intermediate disturbance in a northern hardwood forest. Journal of Geophysical Research-Biogeosciences 119:2292-2311  (Featured in AGU EOS research spotlight, Shultz, D. (2015), As forests age, their climate effects shift, Eos, 96, doi: 10.1029/2015EO026455
  53. Morin* TH, Bohrer G, Frasson* RPdM, Naor-Azrieli* L, Mesi* S, Stefanik* KC, Schäfer KVR, (2014). Environmental drivers of methane fluxes from an urban temperate wetland park. Journal of Geophysical Research-Biogeosciences 119:2188–2208
  54. Schäfer KVR, Tripathee R, Artigas F, Morin* TH, Bohrer G. (2014) Carbon dioxide fluxes of an urban tidal marsh in the Hudson-Raritan estuary. Journal of Geophysical Research – Biogeosciences, 119:2065-2081
  55. Brooker+ MR, Bohrer G, Mouser PJ. (2014). Variations in potential CH4 flux and CO2 respiration from freshwater wetland sediments that differ by microsite location, depth and temperature. Ecological Engineering, 72:84-94
  56. Morin* TH, Bohrer G, Naor-Azrieli* L, Mesi* S, Kenny* WT, Mitsch WJ, Schäfer KVR. (2014) The seasonal and diurnal dynamics of methane flux at a created urban wetland. Ecological Engineering, 72:74-83
  57. Chatziefstratiou* EK, Velissariou* V, Bohrer G. (2014) Resolving the effects of aperture and volume restriction of the flow by semi-porous barriers using large-eddy simulations. Boundary-Layer Meteorology, 152:329–348
  58. Matheny* AM, Bohrer G, Stoy PC, Baker I, Black A, Desai A, Dietze M, Gough CM, Ivanov VY, Jassal P, Novick K, Schäfer KVR, Verbeeck H. (2014) Characterizing the diurnal patterns of errors in the prediction of evapotranspiration by several land-surface models: an NACP analysis. Journal of Geophysical Research – Biogeosciences, 119:10.1002/2014JG002623
  59. Keenan TF, Gray J, Friedl M, Toomey M, Bohrer^ G, Hollinger DY, Munger JW, O’Keefe J, Schmid HP, Wing IS, Yang B, Richardson AD. (2014) Net carbon uptake has increased through warming-induced changes in temperate forest phenology. Nature Climate Change, 4:596-604
  60. Dodge* S, Bohrer G, Bildstein K, Davidson* SC, Weinzierl R, Bechard MJ, Barber D, Kays R, Han J, Wikelski M. (2014) Environmental drivers of variability in the movement ecology of turkey vultures (Cathartes aura) in North and South America. Philosophical Transactions of the Royal Society B: Biological Science, 369:20130195
  61. Verma M, Friedl MA, Richardson AD, Kiely G, Cescatti A, Law BE, Wohlfahrt G, Gielen B, Roupsard O, Moors EJ, Toscano P, Vaccari FP, Gianelle D, Bohrer^ G, Varlagin A, Buchmann N, van Gorsel E, Montagnani L, Propastin P (2014) Remote sensing of annual terrestrial gross primary productivity from MODIS: an assessment using the FLUXNET La Thuile data set. Biogeosciences, 11:2185-2200
  62. Damschen EI, Baker DV, Bohrer G, Nathan R, Orrock JL, Turner JR, Brudvig LA, Haddad NM, Levey DJ, Tewksbury JT. (2014) How fragmentation and corridors affect wind dynamics and seed dispersal in open habitats. Proceedings of the National Academy of Science USA, 111:3484–3489 (Featured in Nature "News and views" (
  63. Keenan TF, Hollinger DY, Bohrer G, Dragoni D, Munger JW, Schmid HP, Richardson AD. (2014) Air pollution and forest water use, reply. Nature, 507:E2-E3.
  64. Bohrer G, Beck PSA, Ngene SN, Skidmore AK, Douglas-Hamilton I. (2014) Elephant movement closely tracks precipitation-driven vegetation dynamics in a Kenyan forest-savanna landscape. Movement Ecology, 2:2;
  65. He+ L, Ivanov VY, Bohrer G, Maurer* KD, Vogel CS, Moghaddam M. (2014) Effects of fine-scale soil moisture and canopy heterogeneity on energy and water fluxes in a northern temperate mixed forest. Agricultural & Forest Meteorology, 184:243-256
  66. Fu D, Chen B, Zhang H, Wang J, Black TA, Amiro B, Bohrer^ G, Bolstad P, Coulter R, Rahman F, Dunn A, McCaughey H, Meyers T, Verma S. (2014) Estimating landscape net ecosystem exchange at high spatial-temporal resolution based on Landsat data, an improved upscaling model framework, and eddy covariance flux measurements. Remote Sensing of Environment, 141:90–104
  67. Bartlam-Brooks HLA, Beck PSA, Bohrer G, Harris S. (2013) When to head for greener pastures? Exploiting satellite images to predict a zebra migration and reveal its cues. Journal of Geophysical Research-Biogeosciences, 118:1427–1437  (Featured in Nature "Research Highlights":
  68. Thomsen* JE, Bohrer G, Matheny* AM, Ivanov VY, He+ L, Renninger H, Schäfer KVR. (2013) Contrasting hydraulic strategies during dry soil conditions in Quercus rubra and Acer rubrum in a sandy site in Michigan. Forests, 4:1106-1120
  69. Detto M, Bohrer G, Goedhart-Nietz J, Maurer* KD, Gough CM, Curtis PS. (2013) Multi-variate conditional Granger causality analysis for lagged response of soil respiration in a temperate forest. Entropy, 15:4266-4284
  70. Chatziefstratiou* EK, Bohrer G, Bova* AS, Subramanian* R, Frasson* RPM, Scherzer A, Butler BW, Dickinson MB. (2013) FireStem2D - a two-dimensional heat transfer model for simulating tree stem injury in fires. PLoS One 8:e70110
  71. Keenan TF, Hollinger DY, Bohrer G, Dragoni D, Munger JW, Schmid HP, Richardson AD. (2013) Increase in forest water-use efficiency as atmospheric carbon dioxide concentrations rise. Nature 499:324-327
  72. He+ L, Ivanov VY, Bohrer G, Thomsen* JE, Vogel CS, Moghaddam M. (2013) Temporal dynamics of soil moisture in a northern temperate mixed successional forest after a prescribed intermediate disturbance. Agricultural & Forest Meteorology 180:22-33
  73. Maurer* KD, Hardiman+ BS, Vogel CS, Bohrer G. (2013) Canopy-structure effects on surface roughness parameters: Observations in a Great Lakes mixed-deciduous forest. Agricultural & Forest Meteorology 177:24-34
  74. Gough CM, Hardiman+ BS, Nave LE, Bohrer G, Maurer* KD, Vogel CS, Nadelhoffer KJ, Curtis PS. (2013) Sustained carbon uptake and storage following moderate disturbance in a Great Lakes forest. Ecological Applications 23:1202–1215
  75. Hardiman+ BS, Bohrer G, Gough CM, Curtis PS. (2013) Canopy structural changes following widespread mortality of canopy dominant trees. Forests 4:537-552;
  76. Dodge* S, Bohrer G, Weinzierl R, Davidson* SC, Kays R, Douglas D, Cruz S, Han J, Brandes D, Wikelski M. (2013) The Environmental-Data Automated Track Annotation (Env-DATA) system: linking animal tracks with environmental data. Movement Ecology 1:3
  77. Safi K, Kranstauber B, Weinzierl R, Griffin L, Rees EC, Cabot D, Cruz S, Proaño C, Takekawa JY, Newman SH, Waldenström J, Bengtsson D, Kays R, Wikelski M, Bohrer G. (2013). Flying with the wind: scale dependency of speed and direction measurements in the modelling of wind support in avian flight. Movement Ecology 1:4
  78. Wu C, Chen JM, Black TA, Desai AR, Gonsamo A, Jassal RS, Price DT, Gough CM, Dragoni D, Bohrer^ G, Herbst M, Gielen B, Berninger F, Kurz WA, Vesala T, Mammarella I, Pilegaard K, Blanken PD. (2013) Interannual variability of net ecosystem productivity in forests is explained by carbon flux phenology in autumn. Global Ecology and Biogeography 22:994–1006
  79. Hardiman+ BS, Gough CM, Halperin A, Hofmeister KL, Nave LE, Bohrer G, Curtis PS. (2013) Maintaining high rates of carbon storage in old forests: A mechanism linking canopy structure to forest function. Forest Ecology and Management 298:111-119
  80. Bohrer G, Zhu* K, Jones* RL, Curtis PS. (2013) Optimizing wind power generation while minimizing wildlife impacts in an urban area. Plos One 8:e56036
  81. Hyde K, Dickinson MB, Bohrer G, Calkin D, Evers L, Gilbertson-Day J, Nicolet T, Ryan K, Tague C. (2013) Research and development supporting risk-based wildfire effects prediction for fuels and fire management: status and needs. International Journal of Wildland Fire 22:37-50
  82. Maurer* KD, Bohrer G, Medvigy D, Wright SJ. (2013) The timing of abscission affects dispersal distance in a wind‐dispersed tropical tree. Functional Ecology 27:208–218
  83. Barr AG, Richardson AD, Hollinger DY, Papale D, Arain MA, Black TA, Bohrer^ G, Dragoni D, Fischer ML, Gu L, Law BE, Margolis HA, McCaughey JH, Munger JW, Oechel W, Schaeffer K. (2013) Use of change-point detection for friction-velocity threshold evaluation in eddy-covariance studies. Agricultural & Forest Meteorology 171:31-45
  84. Volis S, Bohrer G (2013) Joint evolution of seed traits along an aridity gradient: seed size and dormancy are not two substitutable evolutionary traits in temporally heterogeneous environment New Phytologist 197:655-667
  85. Douglas D, Weinzierl R, Davidson S, Kays R, Wikelski M, Bohrer G. (2012) Moderating Argos location errors in animal tracking data. Methods in Ecology and Evolution 3:999-1007
  86. Lasslop G, Migliavacca M, Bohrer^ G, Reichstein M, Bahn M, Ibrom A, Jacobs C, Kolari P, Papale D, Vesala T, Wohlfahrt G, Cescatti A. (2012) On the choice of the driving temperature for eddy-covariance carbon dioxide flux partitioning. Biogeosciences 9:5243–5259
  87. Wang T, Brender P, Ciais P, Piao S, Mahecha MD, Chevallier F, Reichstein M, Ottlé C, Maignan F, Arain A, Bohrer^ G, Cescatti A, Kiely G, Law BE, Lutz M, Montagnani L, Moors E, Osborne B, Panferov O, Papale D, Vaccari FP (2012) State-dependent errors in a land surface model across biomes inferred from eddy covariance observations on multiple timescales, Ecological Modelling, 246: 11-25
  88. Yan H, Wang SQ, Billesbach D, Oechel W, Zhang JH, Meyers T, Martin TA, Matamala R, Baldocchi D, Bohrer^ G, Dragoni D, Scott R. (2012). Global estimation of evapotranspiration using a leaf area index-based surface energy and water balance model. Remote Sensing of Environment 124:581-595
  89. Wu C, Chen JM, Kurz WA, Price DT, Lafleur PM, Jassal RS, Dragoni D, Bohrer^ G, Gough CM, Verma SB, Suyker AE, Munger JW (2012) Interannual and spatial impacts of phenological transitions, growing season length, and spring and autumn temperatures on carbon sequestration in North America. Global and Planetary Change 92:179–190
  90. Kremer A, Ronce O, Robledo-Arnuncio JJ, Guillaume F, Bohrer G, Nathan R, Birdle JR, Gomulkiewicz R, Klein EK, Ritland K, Kuparinen A, Gerber S, Schueler S. (2012) Long distance gene flow and adaptation of forest trees to rapid climate change. Ecology Letters 15:378–392
  91. Garrity* SR, Meyer* K, Maurer* KD, Hardiman+ BS, Bohrer G (2012) Estimating plot-level tree structure in a deciduous forest by combining allometric equations, spatial wavelet analysis and airborne LiDAR. Remote Sensing Letters, 3:443–451
  92. Richardson AD, Anderson RS, Arain MA, Barr AG, Bohrer^ G, Chen G, Chen JM, Ciais P, Davis KJ, Desai AJ, Dietze MC, Dragoni D, Garrity* SR, Gough CM, Grant R, Hollinger DY, Margolis HA, McCaughey H, Migliavacca M, Monson RK, Munger JW, Poulter B, Raczka BM, Ricciuto DM, Sahoo AK, Schaefer K, Tian H, Vargas R, Verbeeck H, Xiao J, Xue Y (2012) Terrestrial biosphere models need better representation of vegetation phenology: Results from the North American Carbon Program site synthesis. Global Change Biology, 18:566–584
  93. Bohrer G, Brandes D, Mandel+ JT, Bildstein KL, Miller TA, Lanzone M, Katzner T, Maisonneuve C, Trembley JA (2012) Estimating updraft velocity components over large spatial scales: Contrasting migration strategies of golden eagles and turkey vultures. Ecology Letters, 15:96-103
  94. Lee X, Goulden ML, Hollinger DY, Barr A, Black TA, Bohrer^ G, Bracho R, Drake B, Goldstein A, Gu L, Katul G, Kolb T, Law BE, Margolis H, Meyers T, Monson R, Munger W, Oren O, Paw U KT, Richardson AD, Schmid HP, Staebler R, Wofsy S, Zhao L. (2011) Observed increase in local cooling effect of deforestation at higher latitudes. Nature, 479:384–387
  95. Nave LE, Gough CM, Maurer* KD, Bohrer G, Hardiman+ BS, Le Moine J, Munoz AB, Nadelhoffer KJ, Sparks JP, Strahm BD, Vogel CS, Curtis PS (2011) Disturbance and the resilience of coupled carbon and nitrogen cycling in a north temperate forest. Journal of Geophysical Research-Biogeosciences, 116:G04016, doi:10.1029/2011JG001758
  96. Garrity* SR, Bohrer G, Maurer* KD, Mueller KL, Vogel CS, Curtis PS. (2011) A comparison of multiple phenology data sources for estimating seasonal transitions in deciduous forest carbon exchange. Agricultural & Forest Meteorology, 151:1741–1752 
  97. Yuan W, Luo Y, Liu S, Yu G, Zhou T, Bahn M, Black A, Desai AR, Cescatti A, Marcolla B, Jacobs C, Chen J, Aurela M, Berhnofer C, Bielen B, Bohrer^ G, Cook DR, Dragoni D, Dunn AL, Gianelle D, Grünwald T, Ibrom A, Leclerc MY, Lindroth A, Liu H, Marchesini LB, Montagnani L, Pita G, Rodeghiero M, Rodrigues A, Starr G, Stoy PC. (2011) Redefinition and global estimation of basal ecosystem respiration rate. Global Biogeochemical Cycles, 25:GB4002, doi:10.1029/2011GB00415
  98. Bova* AS, Bohrer G, Dickinson MB (2011) A model of gas mixing into single-entrance tree cavities during wildland fires. Canadian Journal of Forest Research, 41:1659-1670
  99. Niu S, Luo Y, Fei S, Montagnani L, Bohrer^ G, Janssens I, Gielen B, Rambal S, Moors E, Matteucci G. (2011) Seasonal hysteresis of net ecosystem exchange in response to temperature change: patterns and causes. Global Change Biology, 17:3102-3114
  100. Hardiman+ BS, Bohrer G, Gough CM, Vogel CS, Curtis PS (2011) The role of canopy structural complexity in wood net primary production of a maturing northern deciduous forest. Ecology, 92:1818–1827
  101. Mandel+ JT, Bohrer G, Winkler DW, Barber DR, Houston CS, Bildstein KL (2011) Migration path annotation: Cross-continental study of migration flight response to environmental conditions. Ecological Applications, 21:2258–2268
  102. Nathan R, Katul GG, Bohrer G, Kuparinen A, Soons MS, Thompson SE, Trakhtenbrot A, Horn HS (2011) Mechanistic models of seed dispersal by wind. Theoretical Ecology, 4:113–132
  103. Bohrer G, Katul GG, Walko RL, Avissar R (2009) Exploring the effects of microscale structural heterogeneity of forest canopies using large-eddy simulations. Boundary Layer Meteorology, 132:351–382
  104. Bohrerova Z, Bohrer G, Bolch MA, Cho KD, Linden KG (2009) Determining the viability response of pine pollen to atmospheric conditions during long-distance dispersal. Ecological Applications, 19:656-667
  105. Wright SJ, Trakhtenbrot A, Bohrer G, Detto M, Horvitz N, Katul GG, Muller-Landau HC, Jones FA, Nathan R (2008) Understanding strategies for seed dispersal by wind under contrasting atmospheric conditions. Proceedings of the National Academy of Science USA, 105:19084–19089
  106. Mandel+ JT, Bildstein KL, Bohrer G, Winkler DW (2008) Movement ecology of migration in turkey vultures. Proceedings of the National Academy of Science USA, 105:19102-19107
  107. Colinas J, Schmidler SC, Bohrer G, Iordanov B, Benfey PN. (2008) Intergenic and genic sequence lengths have opposite relationships with respect to gene expression. PLoS ONE, 11:e3670;
  108. Bohrer G, Katul GG, Nathan R, Walko RL, Avissar R (2008) Effects of canopy heterogeneity, seed abscission and inertia on wind driven dispersal kernels of tree seeds. Journal of Ecology, 96: 569-580
  109. Bohrer G, Wolosin M, Brady R, Avissar R (2007) A Virtual canopy Generator (V-CaGe) for modeling complex heterogeneous forest canopies at high resolution. Tellus B., 59:566-576
  110. Ewers EB, Oren R, Kim H-S, Bohrer G, Lai CT, Johnsen KH (2007) Effects of hydraulic architecture and spatial variation in light on mean stomatal conductance of tree branches and crowns. Plant Cell & Environment, 30:483-496
  111. Da Silva RR, Bohrer G, Otte M, Werth D, Avissar R (2006) Sensitivity of ice storms in the Southeastern United States to Atlantic SST – Insights from a case study of the December 2002 storm. Monthly Weather Review, 134:1454-1464
  112. Bohrer G, Mourad H, Laursen TA, Drewry D, Avissar R, Poggi D, Oren R, Katul GG (2005) Finite-element tree canopy hydrodynamics model (FETCH) using porous media flow within branching elements – a new representation of tree hydrodynamics. Water Resource Research, 41:W11404
  113. Bohrer G, Nathan R, Volis S (2005) Effects of long distance dispersal for metapopulation survival and genetic structure at ecological time and spatial scales. Journal of Ecology, 93:1029-1041
  114. Bohrerova Z, Bohrer G, Mohanraj SM, Ducoste J, Linden KG (2005) Experimental measurements of fluence distribution in a UV reactor using fluorescent microspheres. Environmental Science & Technology, 39:8925-8930
  115. Nathan R, Sapir N, Trakhtenbrot A, Katul GG, Bohrer G, Otte M, Avissar R, Sons MB, Horn HS, Wikelski M, Levin SA (2005) Long distance biological transport processes through the air: Can nature’s complexity be unfolded in-silicoDiversity & Distributions, 11:131-137
  116. Volis S, Bohrer G, Oostermeijer G, Van Tienderen P (2005) Regional consequences of local population demography and genetics in relation to habitat management in Gentiana pneumonantheConservation Biology, 19:357-367
  117. Bohrerova Z, Stralkova R, Podesvova J, Bohrer G, Pokorny E (2004) The relationship between redox potential and nitrification under different sequences of crop rotations. Soil & Tillage Research, 77:25-33
  118. Bohrer G, Kagan-Zur V, Roth-Bejerano N, Ward D, Beck G, Bonifacio E (2003) Effects of different Kalahari-Desert VA mycorrhizal communities on mineral acquisition and depletion from the soil by host plants. Journal of Arid Environments, 55:193-208
  119. Bohrer G, Shem-Tov S, Summer A, Or K, Salts D (2002) The effectiveness of various rabies spatial vaccination patterns in a simulated host population with clumped distribution. Ecological Modeling, 152:205-211
  120. Bohrer G, Kagan-Zur V, Roth-Bejerano N, Ward D (2001) Effects of environmental variables on vesicular-arbuscular mycorrhizal abundance in wild populations of Vangueria infausta Journal of Vegetation Science, 12:279-288


Conference Proceeding Papers

  1. Dodge* S, Bohrer G, Weinzierl R. (2012) MoveBank Track Annotation Project: Linking Animal Movement Data with the Environment to Discover the Impact of Environmental Change in Animal migration. Proceedings, Workshop on GIScience in the Big Data Age 2012, 7th International Conference on Geographic Information Science, Columbus OH. pp 35-41;
  2. Bohrer G, Longo M, Zielinski DJ, Brady R (2008) VR visualization as an interdisciplinary collaborative data exploration tool for large eddy simulations of biosphere-atmosphere interactions. InBebis, G. (ed), Proceedings, Advances in Visual Computing, 4th International Symposium, ISVC 2008, Las Vegas, NV, USA, December 1-3, 2008, Part I. Lecture Notes Computer Science 5358:866-876;


Conference Proceeding Short Papers/Extended Abstracts

  1. Bohrer G, Kays R, Davidson* SC, Wienzierl R, Dodge* S, Mcclain* KM, Wikelski M (2015) Remote sensing in support of endangered species management and animal movement research – the Env-DATA tool pack. Proceedings of the 66th International Astronautical Congress, International Astronautical Federation, IAC-15,B5,2,8,x30258
  2. Bohrer G, Beck PSA, Bartlam-Brooks HLA, Ngene SM (2014) Hierarchical testing of individual-based models to determine effective environmental drivers of movement. Proceedings of Analysis of Movement Data - GIScience 2014 workshop, 2.
  3. Chatziefstratiou* EK, Bohrer G, Bova* AS, Dickinson MB (2012) FireStemII – A 2-D heat transfer model for simulation of stem damage in prescribed fires. Proceedings of the 4th Fire in Eastern Oak Forests Conference, GTR-NRS-P-102: 219-222

  4. Velissariou* V & Bohrer G (2010) Resolving a forest-strip induced uplift region using the shaved-grid-cell method with large eddy simulations. Proceedings of the 29th Conference on Agricultural and Forest Meteorology, 13.3.

Book chapters

  1. Kremer A, Ronce O, Robledo-Arnuncio JJ, Guillaume F, Bohrer G, Nathan R, Birdle JR, Gomulkiewicz R, Klein EK, Ritland K, Kuparinen A, Gerber S, Schueler S. (2016) Long distance gene flow and adaptation of forest trees to rapid climate change. In: Kremer A, Hayes S, González-Martínez SC. (Eds.)  Evolution of Trees and Forest Communities: Ten Years of the EVOLTREE network. EVOLTREE network, Bordeaux, France. (192 pages, ISBN : 978-2-9519296-3-9) pp 115-132
  2. Bohrer G, Beck G, Ward D, Roth-Bejerano N, Kagan-Zur V (2008) Arbuscular micorrhizae - plant - environment interactions in a wild host, Vangueria infausta, from the Kalahari desert, South Africa. In: Montaño Arias NM, Camargo-Ricalde SL, García-Sánchez R, Monroy Ata A (Eds.) Arbuscular mycorrhizae in arid and semiarid ecosystems. Mundi-Prensa, México (235 pages) pp 165-184.



Bohrer G, (2007) Large-eddy simulations of forest canopies for determination of biological dispersal by wind. PhD Thesis, Duke University, Department of Civil and Environmental Engineering. Supervisor- Roni Avissar Forest_Canopies_for_Determination_of_Biological_Dispersal_by_Wind/links/54358c940cf2643ab9867aec.pdf

Bohrer G, (2001) Evidence of host and environmental preferences in wild communities of VAM fungi in the Kalahari Desert. Masters Thesis, Ben Gurion University, Beer Sheva, Israel, Department of Life Sciences. Supervisors- Varda Kagan-Zur, David Ward, Nurith Roth-Bejerano and_environmental_preferences_in_wild_communities_of_VAM_fungi_in_the_Kalahari_Desert


*    Bohrer's student, post doc or technician

+   Co-supervised by Bohrer as a thesis committee member

^   Bohrer contribution as a flux-site PI to an Ameriflux / Fluxnet / NACP multi-site study